Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.66□□□□□ -0.54
Six5P70178 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Six5P70178 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Six5P70178 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Six5P70178 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Gm13392-201ENSMUST00000117708 150 ntBASIC11.66□□□□□ -0.54
Six5P70178 Gm23119-201ENSMUST00000158610 140 ntBASIC11.66□□□□□ -0.54
Six5P70178 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Six5P70178 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Six5P70178 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Six5P70178 Gm18304-201ENSMUST00000189162 546 ntBASIC11.66□□□□□ -0.54
Six5P70178 Gm37201-201ENSMUST00000191845 523 ntBASIC11.66□□□□□ -0.54
Six5P70178 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.66□□□□□ -0.54
Six5P70178 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.66□□□□□ -0.54
Six5P70178 Gm7046-201ENSMUST00000221351 977 ntBASIC11.66□□□□□ -0.54
Six5P70178 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Six5P70178 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Six5P70178 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six5P70178 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.66□□□□□ -0.54
Six5P70178 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.65□□□□□ -0.54
Six5P70178 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.65□□□□□ -0.54
Six5P70178 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.65□□□□□ -0.54
Six5P70178 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Six5P70178 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.65□□□□□ -0.54
Six5P70178 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Six5P70178 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Six5P70178 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.65□□□□□ -0.54
Six5P70178 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.65□□□□□ -0.54
Six5P70178 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Six5P70178 Gm9022-201ENSMUST00000182482 992 ntBASIC11.65□□□□□ -0.54
Six5P70178 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.65□□□□□ -0.54
Six5P70178 Gm6013-201ENSMUST00000212264 699 ntBASIC11.65□□□□□ -0.54
Six5P70178 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Gm10076-201ENSMUST00000073238 384 ntBASIC11.65□□□□□ -0.54
Six5P70178 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Six5P70178 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.65□□□□□ -0.54
Six5P70178 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Six5P70178 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Six5P70178 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.65□□□□□ -0.55
Six5P70178 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.65□□□□□ -0.55
Six5P70178 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Six5P70178 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.65□□□□□ -0.55
Six5P70178 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.64□□□□□ -0.55
Six5P70178 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Six5P70178 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Six5P70178 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.64□□□□□ -0.55
Six5P70178 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Six5P70178 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.64□□□□□ -0.55
Six5P70178 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.64□□□□□ -0.55
Six5P70178 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Six5P70178 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 424.2 ms