Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Crnkl1P63154 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Crnkl1P63154 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Crnkl1P63154 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.33□□□□□ -0.44
Crnkl1P63154 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.33□□□□□ -0.44
Crnkl1P63154 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.33□□□□□ -0.44
Crnkl1P63154 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.33□□□□□ -0.44
Crnkl1P63154 Gm45668-201ENSMUST00000211271 493 ntBASIC12.33□□□□□ -0.44
Crnkl1P63154 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.33□□□□□ -0.44
Crnkl1P63154 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Crnkl1P63154 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Crnkl1P63154 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.33□□□□□ -0.44
Crnkl1P63154 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm11524-201ENSMUST00000119349 807 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm12341-201ENSMUST00000119724 503 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm12403-201ENSMUST00000121384 959 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm23984-201ENSMUST00000157139 203 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm43094-201ENSMUST00000196549 921 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm6745-201ENSMUST00000199216 526 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm42599-201ENSMUST00000201308 469 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm18307-201ENSMUST00000206864 949 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.32□□□□□ -0.44
Crnkl1P63154 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.32□□□□□ -0.44
Crnkl1P63154 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.32□□□□□ -0.44
Crnkl1P63154 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Crnkl1P63154 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.31□□□□□ -0.44
Crnkl1P63154 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Crnkl1P63154 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms