Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.87□□□□□ -0.19
Tpm1P58771 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.87□□□□□ -0.19
Tpm1P58771 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Tpm1P58771 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Tpm1P58771 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.87□□□□□ -0.19
Tpm1P58771 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Tpm1P58771 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Tpm1P58771 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.87□□□□□ -0.19
Tpm1P58771 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tpm1P58771 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Tpm1P58771 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
Tpm1P58771 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.86□□□□□ -0.19
Tpm1P58771 Gm18473-201ENSMUST00000220543 868 ntBASIC13.86□□□□□ -0.19
Tpm1P58771 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Tpm1P58771 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tpm1P58771 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.85□□□□□ -0.19
Tpm1P58771 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Tpm1P58771 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tpm1P58771 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.85□□□□□ -0.19
Tpm1P58771 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tpm1P58771 Gm44872-201ENSMUST00000207864 420 ntBASIC13.85□□□□□ -0.19
Tpm1P58771 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms