Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Mir1894-201ENSMUST00000122802 81 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gm23984-201ENSMUST00000157139 203 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gm8652-201ENSMUST00000181363 964 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gm4034-201ENSMUST00000187674 480 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gm29705-201ENSMUST00000212598 474 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdkn2bP55271 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdkn2bP55271 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Cdkn2bP55271 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Cdkn2bP55271 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cdkn2bP55271 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Gm11814-201ENSMUST00000119515 929 ntBASIC11.89□□□□□ -0.51
Cdkn2bP55271 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Gm22331-201ENSMUST00000158066 136 ntBASIC11.89□□□□□ -0.51
Cdkn2bP55271 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Gm9908-201ENSMUST00000211534 448 ntBASIC11.89□□□□□ -0.51
Cdkn2bP55271 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.89□□□□□ -0.51
Cdkn2bP55271 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.89□□□□□ -0.51
Cdkn2bP55271 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdkn2bP55271 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.88□□□□□ -0.51
Cdkn2bP55271 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.88□□□□□ -0.51
Cdkn2bP55271 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm13315-201ENSMUST00000120376 991 ntBASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm17794-201ENSMUST00000220252 955 ntBASIC11.88□□□□□ -0.51
Cdkn2bP55271 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Gm5356-201ENSMUST00000093326 615 ntBASIC11.88□□□□□ -0.51
Cdkn2bP55271 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdkn2bP55271 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms