Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Gm13736-201ENSMUST00000119272 253 ntBASIC11.14□□□□□ -0.63
Abcd3P55096 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.14□□□□□ -0.63
Abcd3P55096 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Gm23119-201ENSMUST00000158610 140 ntBASIC11.14□□□□□ -0.63
Abcd3P55096 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.14□□□□□ -0.63
Abcd3P55096 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Abcd3P55096 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.14□□□□□ -0.63
Abcd3P55096 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Abcd3P55096 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.14□□□□□ -0.63
Abcd3P55096 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Abcd3P55096 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Abcd3P55096 Gm12314-201ENSMUST00000118104 538 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.13□□□□□ -0.63
Abcd3P55096 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.13□□□□□ -0.63
Abcd3P55096 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.13□□□□□ -0.63
Abcd3P55096 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Gm18304-201ENSMUST00000189162 546 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Abcd3P55096 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Abcd3P55096 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.13□□□□□ -0.63
Abcd3P55096 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Abcd3P55096 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.13□□□□□ -0.63
Abcd3P55096 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Abcd3P55096 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Abcd3P55096 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.12□□□□□ -0.63
Abcd3P55096 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Abcd3P55096 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.12□□□□□ -0.63
Abcd3P55096 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.12□□□□□ -0.63
Abcd3P55096 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Abcd3P55096 Gm12742-201ENSMUST00000117326 410 ntBASIC11.12□□□□□ -0.63
Abcd3P55096 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.12□□□□□ -0.63
Abcd3P55096 Gm11425-201ENSMUST00000119608 498 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms