Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NrlP54846 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NrlP54846 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NrlP54846 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NrlP54846 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NrlP54846 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NrlP54846 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
NrlP54846 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NrlP54846 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NrlP54846 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NrlP54846 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
NrlP54846 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.25□□□□□ -0.29
NrlP54846 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.25□□□□□ -0.29
NrlP54846 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NrlP54846 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.25□□□□□ -0.29
NrlP54846 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.25□□□□□ -0.29
NrlP54846 Gm37666-201ENSMUST00000194110 866 ntBASIC13.25□□□□□ -0.29
NrlP54846 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.25□□□□□ -0.29
NrlP54846 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.25□□□□□ -0.29
NrlP54846 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NrlP54846 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.25□□□□□ -0.29
NrlP54846 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NrlP54846 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NrlP54846 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NrlP54846 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.24□□□□□ -0.29
NrlP54846 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Gm14644-201ENSMUST00000116671 647 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12314-201ENSMUST00000118104 538 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12616-201ENSMUST00000118594 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.24□□□□□ -0.29
NrlP54846 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.24□□□□□ -0.29
NrlP54846 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.24□□□□□ -0.29
NrlP54846 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.24□□□□□ -0.29
NrlP54846 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.24□□□□□ -0.29
NrlP54846 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NrlP54846 Gm12624-201ENSMUST00000177615 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12621-201ENSMUST00000177760 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12615-201ENSMUST00000177970 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12622-201ENSMUST00000177975 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12627-201ENSMUST00000178412 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12625-201ENSMUST00000179122 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12614-201ENSMUST00000179586 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm12613-201ENSMUST00000180323 382 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm29615-201ENSMUST00000185371 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm28224-201ENSMUST00000186078 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm29001-201ENSMUST00000186177 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm28292-201ENSMUST00000186593 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm28101-201ENSMUST00000187608 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm29076-201ENSMUST00000187689 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm28302-201ENSMUST00000187931 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm28646-201ENSMUST00000188220 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm28205-201ENSMUST00000189177 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm29032-201ENSMUST00000189797 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm28695-201ENSMUST00000190300 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 Gm37448-201ENSMUST00000192795 697 ntBASIC13.24□□□□□ -0.29
NrlP54846 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.24□□□□□ -0.29
NrlP54846 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms