Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RoraP51448 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RoraP51448 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RoraP51448 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.83□□□□□ -0.52
RoraP51448 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RoraP51448 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RoraP51448 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RoraP51448 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RoraP51448 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.82□□□□□ -0.52
RoraP51448 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
RoraP51448 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.82□□□□□ -0.52
RoraP51448 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
RoraP51448 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RoraP51448 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.82□□□□□ -0.52
RoraP51448 Gm14109-201ENSMUST00000118814 309 ntBASIC11.82□□□□□ -0.52
RoraP51448 Gm15703-201ENSMUST00000120250 880 ntBASIC11.82□□□□□ -0.52
RoraP51448 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.82□□□□□ -0.52
RoraP51448 Gm27046-201ENSMUST00000182160 463 ntBASIC11.82□□□□□ -0.52
RoraP51448 Gm45186-201ENSMUST00000206874 478 ntBASIC11.82□□□□□ -0.52
RoraP51448 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RoraP51448 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.82□□□□□ -0.52
RoraP51448 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.82□□□□□ -0.52
RoraP51448 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RoraP51448 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.82□□□□□ -0.52
RoraP51448 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
RoraP51448 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RoraP51448 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.82□□□□□ -0.52
RoraP51448 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RoraP51448 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.81□□□□□ -0.52
RoraP51448 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.81□□□□□ -0.52
RoraP51448 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RoraP51448 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RoraP51448 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm13665-201ENSMUST00000120830 528 ntBASIC11.81□□□□□ -0.52
RoraP51448 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.81□□□□□ -0.52
RoraP51448 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.81□□□□□ -0.52
RoraP51448 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm27023-201ENSMUST00000182372 285 ntBASIC11.81□□□□□ -0.52
RoraP51448 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.81□□□□□ -0.52
RoraP51448 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.81□□□□□ -0.52
RoraP51448 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RoraP51448 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms