Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SftpbP50405 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SftpbP50405 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SftpbP50405 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SftpbP50405 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SftpbP50405 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Map1b-203ENSMUST00000223725 2669 ntBASIC12.73□□□□□ -0.37
SftpbP50405 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.73□□□□□ -0.37
SftpbP50405 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.73□□□□□ -0.37
SftpbP50405 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SftpbP50405 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.72□□□□□ -0.37
SftpbP50405 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SftpbP50405 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.72□□□□□ -0.37
SftpbP50405 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.72□□□□□ -0.37
SftpbP50405 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.72□□□□□ -0.37
SftpbP50405 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SftpbP50405 Gm27892-201ENSMUST00000185017 106 ntBASIC12.72□□□□□ -0.37
SftpbP50405 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.72□□□□□ -0.37
SftpbP50405 Gm32025-201ENSMUST00000217960 307 ntBASIC12.72□□□□□ -0.37
SftpbP50405 Gm17794-201ENSMUST00000220252 955 ntBASIC12.72□□□□□ -0.37
SftpbP50405 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SftpbP50405 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.72□□□□□ -0.37
SftpbP50405 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.72□□□□□ -0.37
SftpbP50405 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SftpbP50405 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SftpbP50405 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.72□□□□□ -0.37
SftpbP50405 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SftpbP50405 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.71□□□□□ -0.37
SftpbP50405 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SftpbP50405 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SftpbP50405 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SftpbP50405 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.71□□□□□ -0.37
SftpbP50405 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.71□□□□□ -0.37
SftpbP50405 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SftpbP50405 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SftpbP50405 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SftpbP50405 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SftpbP50405 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.71□□□□□ -0.37
SftpbP50405 Gm27331-201ENSMUST00000183705 60 ntBASIC12.71□□□□□ -0.37
SftpbP50405 Gm4768-201ENSMUST00000206199 686 ntBASIC12.71□□□□□ -0.37
SftpbP50405 Gm29705-201ENSMUST00000212598 474 ntBASIC12.71□□□□□ -0.37
SftpbP50405 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SftpbP50405 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.71□□□□□ -0.38
SftpbP50405 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
SftpbP50405 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SftpbP50405 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SftpbP50405 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.71□□□□□ -0.38
SftpbP50405 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SftpbP50405 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SftpbP50405 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms