Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Brca1P48754 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.72□□□□□ -0.21
Brca1P48754 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.72□□□□□ -0.21
Brca1P48754 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Brca1P48754 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brca1P48754 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Brca1P48754 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Brca1P48754 Gm43778-201ENSMUST00000199438 199 ntBASIC13.71□□□□□ -0.21
Brca1P48754 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Brca1P48754 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.71□□□□□ -0.21
Brca1P48754 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.71□□□□□ -0.21
Brca1P48754 Gm4604-201ENSMUST00000025040 390 ntBASIC13.71□□□□□ -0.21
Brca1P48754 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.71□□□□□ -0.21
Brca1P48754 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Brca1P48754 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Brca1P48754 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.71□□□□□ -0.21
Brca1P48754 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brca1P48754 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Gm25063-201ENSMUST00000104666 94 ntBASIC13.71□□□□□ -0.22
Brca1P48754 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.71□□□□□ -0.22
Brca1P48754 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brca1P48754 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.7□□□□□ -0.22
Brca1P48754 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.7□□□□□ -0.22
Brca1P48754 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.7□□□□□ -0.22
Brca1P48754 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.7□□□□□ -0.22
Brca1P48754 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.7□□□□□ -0.22
Brca1P48754 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Brca1P48754 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Brca1P48754 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.7□□□□□ -0.22
Brca1P48754 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Brca1P48754 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.7□□□□□ -0.22
Brca1P48754 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Brca1P48754 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.7□□□□□ -0.22
Brca1P48754 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.7□□□□□ -0.22
Brca1P48754 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brca1P48754 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Brca1P48754 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brca1P48754 Gm11660-201ENSMUST00000120955 412 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.69□□□□□ -0.22
Brca1P48754 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.69□□□□□ -0.22
Brca1P48754 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms