Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rfx3P48381 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.26□□□□□ -0.61
Rfx3P48381 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.26□□□□□ -0.61
Rfx3P48381 Gm24644-201ENSMUST00000157114 139 ntBASIC11.26□□□□□ -0.61
Rfx3P48381 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.26□□□□□ -0.61
Rfx3P48381 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Gm23363-201ENSMUST00000175024 79 ntBASIC11.26□□□□□ -0.61
Rfx3P48381 Gm27839-201ENSMUST00000184242 106 ntBASIC11.26□□□□□ -0.61
Rfx3P48381 Gm29649-201ENSMUST00000185649 419 ntBASIC11.26□□□□□ -0.61
Rfx3P48381 Gm43438-201ENSMUST00000198133 379 ntBASIC11.26□□□□□ -0.61
Rfx3P48381 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.26□□□□□ -0.61
Rfx3P48381 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.26□□□□□ -0.61
Rfx3P48381 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Rfx3P48381 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.26□□□□□ -0.61
Rfx3P48381 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Rfx3P48381 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfx3P48381 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rfx3P48381 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.25□□□□□ -0.61
Rfx3P48381 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rfx3P48381 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Gm15824-201ENSMUST00000119516 955 ntBASIC11.25□□□□□ -0.61
Rfx3P48381 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.25□□□□□ -0.61
Rfx3P48381 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.25□□□□□ -0.61
Rfx3P48381 Gm9630-201ENSMUST00000178304 885 ntBASIC11.25□□□□□ -0.61
Rfx3P48381 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Gm27331-201ENSMUST00000183705 60 ntBASIC11.25□□□□□ -0.61
Rfx3P48381 Gm37042-201ENSMUST00000193816 581 ntBASIC11.25□□□□□ -0.61
Rfx3P48381 Gm19184-201ENSMUST00000196798 928 ntBASIC11.25□□□□□ -0.61
Rfx3P48381 Gm29705-201ENSMUST00000212598 474 ntBASIC11.25□□□□□ -0.61
Rfx3P48381 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rfx3P48381 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rfx3P48381 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Rfx3P48381 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rfx3P48381 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfx3P48381 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rfx3P48381 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rfx3P48381 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.24□□□□□ -0.61
Rfx3P48381 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.24□□□□□ -0.61
Rfx3P48381 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.24□□□□□ -0.61
Rfx3P48381 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfx3P48381 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.24□□□□□ -0.61
Rfx3P48381 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rfx3P48381 Gm35960-201ENSMUST00000202712 767 ntBASIC11.24□□□□□ -0.61
Rfx3P48381 Gm18062-201ENSMUST00000208020 547 ntBASIC11.24□□□□□ -0.61
Rfx3P48381 Gm18055-201ENSMUST00000208254 547 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms