Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gli1P47806 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Gm45930-201ENSMUST00000221330 292 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.17□□□□□ -0.46
Gli1P47806 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gli1P47806 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Gli1P47806 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gli1P47806 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gli1P47806 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.16□□□□□ -0.46
Gli1P47806 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gli1P47806 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gli1P47806 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Gm14350-201ENSMUST00000116642 640 ntBASIC12.16□□□□□ -0.46
Gli1P47806 Gm10156-201ENSMUST00000122364 462 ntBASIC12.16□□□□□ -0.46
Gli1P47806 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.16□□□□□ -0.46
Gli1P47806 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.16□□□□□ -0.46
Gli1P47806 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.16□□□□□ -0.46
Gli1P47806 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.16□□□□□ -0.46
Gli1P47806 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gli1P47806 Gm7783-201ENSMUST00000204795 781 ntBASIC12.16□□□□□ -0.46
Gli1P47806 Gm6458-201ENSMUST00000211573 635 ntBASIC12.16□□□□□ -0.46
Gli1P47806 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.16□□□□□ -0.46
Gli1P47806 Itm2b-204ENSMUST00000228637 783 ntBASIC12.16□□□□□ -0.46
Gli1P47806 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gli1P47806 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gli1P47806 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.16□□□□□ -0.46
Gli1P47806 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gli1P47806 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.16□□□□□ -0.46
Gli1P47806 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Gli1P47806 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Gli1P47806 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gli1P47806 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.15□□□□□ -0.46
Gli1P47806 Gm42627-201ENSMUST00000197347 224 ntBASIC12.15□□□□□ -0.46
Gli1P47806 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.15□□□□□ -0.46
Gli1P47806 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.15□□□□□ -0.46
Gli1P47806 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.15□□□□□ -0.46
Gli1P47806 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gli1P47806 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gli1P47806 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms