Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
TfamP40630 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TfamP40630 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.05□□□□□ -0.48
TfamP40630 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TfamP40630 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TfamP40630 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.04□□□□□ -0.48
TfamP40630 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
TfamP40630 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Gm11478-201ENSMUST00000117851 599 ntBASIC12.04□□□□□ -0.48
TfamP40630 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.04□□□□□ -0.48
TfamP40630 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TfamP40630 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.04□□□□□ -0.48
TfamP40630 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.04□□□□□ -0.48
TfamP40630 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TfamP40630 Daam2-202ENSMUST00000224595 1926 ntBASIC12.03□□□□□ -0.48
TfamP40630 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Pck2-205ENSMUST00000226352 2784 ntBASIC12.03□□□□□ -0.48
TfamP40630 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.03□□□□□ -0.48
TfamP40630 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.03□□□□□ -0.48
TfamP40630 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 Gm12384-201ENSMUST00000119228 919 ntBASIC12.03□□□□□ -0.48
TfamP40630 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TfamP40630 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.03□□□□□ -0.48
TfamP40630 Gm26927-201ENSMUST00000182385 965 ntBASIC12.03□□□□□ -0.48
TfamP40630 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.03□□□□□ -0.48
TfamP40630 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.03□□□□□ -0.48
TfamP40630 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 Gm7653-201ENSMUST00000214567 508 ntBASIC12.03□□□□□ -0.48
TfamP40630 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.03□□□□□ -0.48
TfamP40630 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Gm10268-201ENSMUST00000085340 555 ntBASIC12.03□□□□□ -0.48
TfamP40630 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TfamP40630 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms