Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chd1P40201 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chd1P40201 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC18.22■□□□□ 0.51
Chd1P40201 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Chd1P40201 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Chd1P40201 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC18.21■□□□□ 0.51
Chd1P40201 Gm43163-201ENSMUST00000196571 442 ntBASIC18.21■□□□□ 0.51
Chd1P40201 Gm5996-201ENSMUST00000211110 718 ntBASIC18.21■□□□□ 0.51
Chd1P40201 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Gm8181-201ENSMUST00000062242 669 ntBASIC18.21■□□□□ 0.51
Chd1P40201 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC18.21■□□□□ 0.51
Chd1P40201 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd1P40201 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Chd1P40201 Gm37348-201ENSMUST00000193104 1789 ntBASIC18.21■□□□□ 0.5
Chd1P40201 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Chd1P40201 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Chd1P40201 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Chd1P40201 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Mir7035-201ENSMUST00000184713 82 ntBASIC18.2■□□□□ 0.5
Chd1P40201 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Gm8384-201ENSMUST00000190905 704 ntBASIC18.2■□□□□ 0.5
Chd1P40201 Gm43249-201ENSMUST00000200464 458 ntBASIC18.2■□□□□ 0.5
Chd1P40201 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC18.2■□□□□ 0.5
Chd1P40201 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Gm5939-201ENSMUST00000119613 2874 ntBASIC18.2■□□□□ 0.5
Chd1P40201 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC18.2■□□□□ 0.5
Chd1P40201 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC18.2■□□□□ 0.5
Chd1P40201 Gm37452-201ENSMUST00000194416 1160 ntBASIC18.2■□□□□ 0.5
Chd1P40201 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Chd1P40201 Gm8146-201ENSMUST00000192106 1847 ntBASIC18.2■□□□□ 0.5
Chd1P40201 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chd1P40201 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.2■□□□□ 0.5
Chd1P40201 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Chd1P40201 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chd1P40201 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC18.19■□□□□ 0.5
Chd1P40201 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chd1P40201 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chd1P40201 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC18.19■□□□□ 0.5
Chd1P40201 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Chd1P40201 Gm2594-201ENSMUST00000214774 742 ntBASIC18.19■□□□□ 0.5
Chd1P40201 Capsl-202ENSMUST00000226688 739 ntBASIC18.19■□□□□ 0.5
Chd1P40201 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Gm9791-201ENSMUST00000060997 447 ntBASIC18.19■□□□□ 0.5
Chd1P40201 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chd1P40201 Gm5385-201ENSMUST00000118988 1559 ntBASIC18.19■□□□□ 0.5
Chd1P40201 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chd1P40201 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chd1P40201 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chd1P40201 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC18.18■□□□□ 0.5
Chd1P40201 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd1P40201 Gm15197-201ENSMUST00000120526 478 ntBASIC18.18■□□□□ 0.5
Chd1P40201 Gm7741-201ENSMUST00000181445 989 ntBASIC18.18■□□□□ 0.5
Chd1P40201 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chd1P40201 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms