Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Timp3P39876 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Gm14704-201ENSMUST00000120300 874 ntBASIC10.24□□□□□ -0.77
Timp3P39876 Gm14726-201ENSMUST00000120623 896 ntBASIC10.24□□□□□ -0.77
Timp3P39876 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.24□□□□□ -0.77
Timp3P39876 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Gm26956-201ENSMUST00000182176 986 ntBASIC10.24□□□□□ -0.77
Timp3P39876 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.24□□□□□ -0.77
Timp3P39876 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Timp3P39876 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.24□□□□□ -0.77
Timp3P39876 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.24□□□□□ -0.77
Timp3P39876 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.24□□□□□ -0.77
Timp3P39876 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Timp3P39876 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.24□□□□□ -0.77
Timp3P39876 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Timp3P39876 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Timp3P39876 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.24□□□□□ -0.77
Timp3P39876 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.24□□□□□ -0.77
Timp3P39876 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Timp3P39876 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Timp3P39876 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.23□□□□□ -0.77
Timp3P39876 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.23□□□□□ -0.77
Timp3P39876 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.23□□□□□ -0.77
Timp3P39876 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.23□□□□□ -0.77
Timp3P39876 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.23□□□□□ -0.77
Timp3P39876 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.23□□□□□ -0.77
Timp3P39876 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Timp3P39876 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Timp3P39876 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Timp3P39876 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Timp3P39876 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Timp3P39876 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms