Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.4□□□□□ -0.42
LdlrP35951 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LdlrP35951 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
LdlrP35951 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
LdlrP35951 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LdlrP35951 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LdlrP35951 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.39□□□□□ -0.43
LdlrP35951 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LdlrP35951 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LdlrP35951 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Gm13350-201ENSMUST00000120519 479 ntBASIC12.39□□□□□ -0.43
LdlrP35951 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.39□□□□□ -0.43
LdlrP35951 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.39□□□□□ -0.43
LdlrP35951 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.39□□□□□ -0.43
LdlrP35951 Gm38266-201ENSMUST00000194931 421 ntBASIC12.39□□□□□ -0.43
LdlrP35951 Gm43118-201ENSMUST00000199149 775 ntBASIC12.39□□□□□ -0.43
LdlrP35951 Gm45930-201ENSMUST00000221330 292 ntBASIC12.39□□□□□ -0.43
LdlrP35951 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.39□□□□□ -0.43
LdlrP35951 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.39□□□□□ -0.43
LdlrP35951 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
LdlrP35951 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LdlrP35951 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LdlrP35951 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.39□□□□□ -0.43
LdlrP35951 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LdlrP35951 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LdlrP35951 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.38□□□□□ -0.43
LdlrP35951 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
LdlrP35951 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.38□□□□□ -0.43
LdlrP35951 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Gm7584-201ENSMUST00000175829 940 ntBASIC12.38□□□□□ -0.43
LdlrP35951 Gm27501-201ENSMUST00000183599 107 ntBASIC12.38□□□□□ -0.43
LdlrP35951 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.38□□□□□ -0.43
LdlrP35951 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.38□□□□□ -0.43
LdlrP35951 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Gm7783-201ENSMUST00000204795 781 ntBASIC12.38□□□□□ -0.43
LdlrP35951 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.38□□□□□ -0.43
LdlrP35951 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.38□□□□□ -0.43
LdlrP35951 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LdlrP35951 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LdlrP35951 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
LdlrP35951 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LdlrP35951 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.38□□□□□ -0.43
LdlrP35951 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
LdlrP35951 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.38□□□□□ -0.43
LdlrP35951 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms