Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.12□□□□□ -0.31
Rfc1P35601 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.12□□□□□ -0.31
Rfc1P35601 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Gm6447-201ENSMUST00000118905 835 ntBASIC13.12□□□□□ -0.31
Rfc1P35601 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rfc1P35601 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.12□□□□□ -0.31
Rfc1P35601 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.12□□□□□ -0.31
Rfc1P35601 Gm7730-201ENSMUST00000212486 454 ntBASIC13.12□□□□□ -0.31
Rfc1P35601 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rfc1P35601 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Rfc1P35601 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.12□□□□□ -0.31
Rfc1P35601 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rfc1P35601 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.11□□□□□ -0.31
Rfc1P35601 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Rfc1P35601 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.11□□□□□ -0.31
Rfc1P35601 Auts2-212ENSMUST00000178555 309 ntBASIC13.11□□□□□ -0.31
Rfc1P35601 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.11□□□□□ -0.31
Rfc1P35601 Gm44855-201ENSMUST00000205725 362 ntBASIC13.11□□□□□ -0.31
Rfc1P35601 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.11□□□□□ -0.31
Rfc1P35601 Gm6218-201ENSMUST00000219812 628 ntBASIC13.11□□□□□ -0.31
Rfc1P35601 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.11□□□□□ -0.31
Rfc1P35601 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rfc1P35601 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Rfc1P35601 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.11□□□□□ -0.31
Rfc1P35601 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfc1P35601 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rfc1P35601 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rfc1P35601 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.1□□□□□ -0.31
Rfc1P35601 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.1□□□□□ -0.31
Rfc1P35601 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rfc1P35601 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.1□□□□□ -0.31
Rfc1P35601 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms