Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkcdP28867 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PrkcdP28867 Gm24526-201ENSMUST00000082921 158 ntBASIC12.32□□□□□ -0.44
PrkcdP28867 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkcdP28867 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkcdP28867 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PrkcdP28867 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkcdP28867 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.32□□□□□ -0.44
PrkcdP28867 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PrkcdP28867 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.32□□□□□ -0.44
PrkcdP28867 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.32□□□□□ -0.44
PrkcdP28867 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PrkcdP28867 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PrkcdP28867 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
PrkcdP28867 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PrkcdP28867 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.31□□□□□ -0.44
PrkcdP28867 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.31□□□□□ -0.44
PrkcdP28867 Gm15920-201ENSMUST00000118998 402 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.31□□□□□ -0.44
PrkcdP28867 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PrkcdP28867 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.31□□□□□ -0.44
PrkcdP28867 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.31□□□□□ -0.44
PrkcdP28867 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PrkcdP28867 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PrkcdP28867 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PrkcdP28867 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
PrkcdP28867 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.3□□□□□ -0.44
PrkcdP28867 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.3□□□□□ -0.44
PrkcdP28867 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.3□□□□□ -0.44
PrkcdP28867 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PrkcdP28867 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.3□□□□□ -0.44
PrkcdP28867 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Gm27243-201ENSMUST00000183964 521 ntBASIC12.3□□□□□ -0.44
PrkcdP28867 Gm27701-201ENSMUST00000184498 110 ntBASIC12.3□□□□□ -0.44
PrkcdP28867 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.3□□□□□ -0.44
PrkcdP28867 Gm4034-201ENSMUST00000187674 480 ntBASIC12.3□□□□□ -0.44
PrkcdP28867 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Gm7287-201ENSMUST00000205267 602 ntBASIC12.3□□□□□ -0.44
PrkcdP28867 Gm45668-201ENSMUST00000211271 493 ntBASIC12.3□□□□□ -0.44
PrkcdP28867 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PrkcdP28867 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PrkcdP28867 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
PrkcdP28867 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PrkcdP28867 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PrkcdP28867 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms