Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Gm2495-201ENSMUST00000191160 466 ntBASIC12.48□□□□□ -0.41
RxrbP28704 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.48□□□□□ -0.41
RxrbP28704 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.48□□□□□ -0.41
RxrbP28704 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.48□□□□□ -0.41
RxrbP28704 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.48□□□□□ -0.41
RxrbP28704 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.48□□□□□ -0.41
RxrbP28704 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RxrbP28704 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.48□□□□□ -0.41
RxrbP28704 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RxrbP28704 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
RxrbP28704 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RxrbP28704 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RxrbP28704 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.47□□□□□ -0.41
RxrbP28704 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Gm5866-201ENSMUST00000177881 973 ntBASIC12.47□□□□□ -0.41
RxrbP28704 Auts2-212ENSMUST00000178555 309 ntBASIC12.47□□□□□ -0.41
RxrbP28704 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.47□□□□□ -0.41
RxrbP28704 Gm18018-201ENSMUST00000198273 408 ntBASIC12.47□□□□□ -0.41
RxrbP28704 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.47□□□□□ -0.41
RxrbP28704 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.47□□□□□ -0.41
RxrbP28704 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Gm24136-201ENSMUST00000083374 165 ntBASIC12.47□□□□□ -0.41
RxrbP28704 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RxrbP28704 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RxrbP28704 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RxrbP28704 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.46□□□□□ -0.41
RxrbP28704 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RxrbP28704 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
RxrbP28704 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RxrbP28704 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RxrbP28704 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.46□□□□□ -0.41
RxrbP28704 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RxrbP28704 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.46□□□□□ -0.41
RxrbP28704 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RxrbP28704 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
RxrbP28704 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms