Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nckap1P28660 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.43□□□□□ -0.42
Nckap1P28660 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nckap1P28660 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nckap1P28660 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.42□□□□□ -0.42
Nckap1P28660 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.42□□□□□ -0.42
Nckap1P28660 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm12015-201ENSMUST00000117065 843 ntBASIC12.42□□□□□ -0.42
Nckap1P28660 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.42□□□□□ -0.42
Nckap1P28660 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm45433-201ENSMUST00000209386 247 ntBASIC12.42□□□□□ -0.42
Nckap1P28660 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Nckap1P28660 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.42□□□□□ -0.42
Nckap1P28660 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nckap1P28660 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nckap1P28660 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nckap1P28660 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nckap1P28660 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gm7857-201ENSMUST00000117957 358 ntBASIC12.41□□□□□ -0.42
Nckap1P28660 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gm12217-201ENSMUST00000118858 696 ntBASIC12.41□□□□□ -0.42
Nckap1P28660 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.41□□□□□ -0.42
Nckap1P28660 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gm28450-201ENSMUST00000187349 638 ntBASIC12.41□□□□□ -0.42
Nckap1P28660 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.41□□□□□ -0.42
Nckap1P28660 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.41□□□□□ -0.42
Nckap1P28660 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nckap1P28660 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nckap1P28660 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nckap1P28660 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.41□□□□□ -0.42
Nckap1P28660 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.41□□□□□ -0.42
Nckap1P28660 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nckap1P28660 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.41□□□□□ -0.42
Nckap1P28660 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nckap1P28660 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nckap1P28660 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nckap1P28660 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nckap1P28660 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Nckap1P28660 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms