Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Col2a1P28481 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 Gm8731-201ENSMUST00000118088 412 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 Gm12036-201ENSMUST00000120008 530 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Col2a1P28481 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.94□□□□□ -0.18
Col2a1P28481 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col2a1P28481 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.94□□□□□ -0.18
Col2a1P28481 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.94□□□□□ -0.18
Col2a1P28481 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.94□□□□□ -0.18
Col2a1P28481 Gm2553-201ENSMUST00000215986 605 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.94□□□□□ -0.18
Col2a1P28481 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Col2a1P28481 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Col2a1P28481 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Col2a1P28481 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col2a1P28481 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col2a1P28481 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.94□□□□□ -0.18
Col2a1P28481 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col2a1P28481 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Col2a1P28481 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Col2a1P28481 Gm15207-201ENSMUST00000119259 442 ntBASIC13.93□□□□□ -0.18
Col2a1P28481 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.93□□□□□ -0.18
Col2a1P28481 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.93□□□□□ -0.18
Col2a1P28481 Gm44126-201ENSMUST00000204831 514 ntBASIC13.93□□□□□ -0.18
Col2a1P28481 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.93□□□□□ -0.18
Col2a1P28481 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col2a1P28481 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col2a1P28481 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.93□□□□□ -0.18
Col2a1P28481 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col2a1P28481 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col2a1P28481 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Col2a1P28481 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.93□□□□□ -0.18
Col2a1P28481 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.93□□□□□ -0.18
Col2a1P28481 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.93□□□□□ -0.18
Col2a1P28481 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col2a1P28481 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.93□□□□□ -0.18
Col2a1P28481 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col2a1P28481 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Col2a1P28481 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.92□□□□□ -0.18
Col2a1P28481 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col2a1P28481 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms