Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm38002-201ENSMUST00000193255 180 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm7399-201ENSMUST00000032395 858 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.53□□□□□ -0.56
Cd40lgP27548 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cd40lgP27548 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cd40lgP27548 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.52□□□□□ -0.56
Cd40lgP27548 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.52□□□□□ -0.56
Cd40lgP27548 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.52□□□□□ -0.56
Cd40lgP27548 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.52□□□□□ -0.56
Cd40lgP27548 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cd40lgP27548 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd40lgP27548 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cd40lgP27548 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Gm10434-201ENSMUST00000101158 471 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Gm14921-201ENSMUST00000118643 908 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Gm13492-201ENSMUST00000119772 665 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.52□□□□□ -0.57
Cd40lgP27548 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.52□□□□□ -0.57
Cd40lgP27548 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cd40lgP27548 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Cd40lgP27548 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd40lgP27548 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms