Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Sdc1P18828 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.16□□□□□ -0.78
Sdc1P18828 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Sdc1P18828 Gm12485-201ENSMUST00000119641 291 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Gm12291-201ENSMUST00000121627 311 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.16□□□□□ -0.78
Sdc1P18828 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Shd-206ENSMUST00000225145 998 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Sdc1P18828 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.16□□□□□ -0.78
Sdc1P18828 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.16□□□□□ -0.78
Sdc1P18828 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Sdc1P18828 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sdc1P18828 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Sdc1P18828 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.15□□□□□ -0.78
Sdc1P18828 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Sdc1P18828 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.15□□□□□ -0.78
Sdc1P18828 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.15□□□□□ -0.78
Sdc1P18828 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Sdc1P18828 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.15□□□□□ -0.78
Sdc1P18828 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Sdc1P18828 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Sdc1P18828 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.15□□□□□ -0.78
Sdc1P18828 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.15□□□□□ -0.78
Sdc1P18828 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.15□□□□□ -0.78
Sdc1P18828 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.15□□□□□ -0.78
Sdc1P18828 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.15□□□□□ -0.78
Sdc1P18828 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.15□□□□□ -0.78
Sdc1P18828 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Sdc1P18828 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Sdc1P18828 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.15□□□□□ -0.78
Sdc1P18828 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sdc1P18828 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sdc1P18828 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Sdc1P18828 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Sdc1P18828 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Sdc1P18828 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms