Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmga1P17095 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga1P17095 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmga1P17095 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hmga1P17095 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.67□□□□□ -0.38
Hmga1P17095 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hmga1P17095 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga1P17095 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmga1P17095 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmga1P17095 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmga1P17095 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.66□□□□□ -0.38
Hmga1P17095 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmga1P17095 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Gm7722-201ENSMUST00000120646 741 ntBASIC12.66□□□□□ -0.38
Hmga1P17095 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmga1P17095 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmga1P17095 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.66□□□□□ -0.38
Hmga1P17095 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Hmga1P17095 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.66□□□□□ -0.38
Hmga1P17095 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.66□□□□□ -0.38
Hmga1P17095 Gm18711-201ENSMUST00000199341 750 ntBASIC12.66□□□□□ -0.38
Hmga1P17095 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmga1P17095 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmga1P17095 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.66□□□□□ -0.38
Hmga1P17095 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmga1P17095 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmga1P17095 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.66□□□□□ -0.38
Hmga1P17095 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmga1P17095 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Hmga1P17095 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmga1P17095 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmga1P17095 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Gm18734-201ENSMUST00000172937 808 ntBASIC12.65□□□□□ -0.38
Hmga1P17095 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmga1P17095 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Gm44882-201ENSMUST00000205702 802 ntBASIC12.65□□□□□ -0.38
Hmga1P17095 Gm7848-201ENSMUST00000210739 718 ntBASIC12.65□□□□□ -0.38
Hmga1P17095 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.65□□□□□ -0.38
Hmga1P17095 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Hmga1P17095 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.65□□□□□ -0.38
Hmga1P17095 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmga1P17095 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmga1P17095 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.39
Hmga1P17095 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms