Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl1P12850 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl1P12850 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl1P12850 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl1P12850 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cxcl1P12850 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Gm27701-201ENSMUST00000184498 110 ntBASIC10.28□□□□□ -0.76
Cxcl1P12850 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Gm45668-201ENSMUST00000211271 493 ntBASIC10.28□□□□□ -0.76
Cxcl1P12850 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl1P12850 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl1P12850 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cxcl1P12850 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.27□□□□□ -0.77
Cxcl1P12850 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.27□□□□□ -0.77
Cxcl1P12850 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Gm7287-201ENSMUST00000205267 602 ntBASIC10.27□□□□□ -0.77
Cxcl1P12850 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.27□□□□□ -0.77
Cxcl1P12850 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.27□□□□□ -0.77
Cxcl1P12850 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cxcl1P12850 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cxcl1P12850 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cxcl1P12850 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms