Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.5□□□□□ -0.89
Fn1P11276 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.5□□□□□ -0.89
Fn1P11276 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Fn1P11276 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.5□□□□□ -0.89
Fn1P11276 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Fn1P11276 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 Gm2345-201ENSMUST00000193451 589 ntBASIC9.5□□□□□ -0.89
Fn1P11276 Gm19931-201ENSMUST00000198920 368 ntBASIC9.5□□□□□ -0.89
Fn1P11276 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC9.5□□□□□ -0.89
Fn1P11276 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.5□□□□□ -0.89
Fn1P11276 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Fn1P11276 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Gm23272-201ENSMUST00000104053 129 ntBASIC9.49□□□□□ -0.89
Fn1P11276 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Gm23119-201ENSMUST00000158610 140 ntBASIC9.49□□□□□ -0.89
Fn1P11276 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.49□□□□□ -0.89
Fn1P11276 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC9.49□□□□□ -0.89
Fn1P11276 Gm10584-201ENSMUST00000207036 2628 ntBASIC9.49□□□□□ -0.89
Fn1P11276 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Gm10169-201ENSMUST00000121822 348 ntBASIC9.49□□□□□ -0.89
Fn1P11276 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.49□□□□□ -0.89
Fn1P11276 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.49□□□□□ -0.89
Fn1P11276 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC9.49□□□□□ -0.89
Fn1P11276 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Fn1P11276 Gm34379-201ENSMUST00000195036 290 ntBASIC9.49□□□□□ -0.89
Fn1P11276 Gm45094-201ENSMUST00000207013 617 ntBASIC9.49□□□□□ -0.89
Fn1P11276 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC9.49□□□□□ -0.89
Fn1P11276 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Fn1P11276 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Fn1P11276 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.49□□□□□ -0.89
Fn1P11276 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.49□□□□□ -0.89
Fn1P11276 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Fn1P11276 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Fn1P11276 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Fn1P11276 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms