Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NclP09405 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NclP09405 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NclP09405 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NclP09405 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC18.47■□□□□ 0.55
NclP09405 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NclP09405 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC18.47■□□□□ 0.55
NclP09405 Gm45433-201ENSMUST00000209386 247 ntBASIC18.47■□□□□ 0.55
NclP09405 AC093022.5-201ENSMUST00000226841 1079 ntBASIC18.47■□□□□ 0.55
NclP09405 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NclP09405 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NclP09405 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NclP09405 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC18.47■□□□□ 0.55
NclP09405 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NclP09405 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NclP09405 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NclP09405 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC18.46■□□□□ 0.55
NclP09405 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
NclP09405 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC18.46■□□□□ 0.55
NclP09405 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC18.46■□□□□ 0.55
NclP09405 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC18.46■□□□□ 0.55
NclP09405 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC18.46■□□□□ 0.55
NclP09405 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NclP09405 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NclP09405 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC18.46■□□□□ 0.55
NclP09405 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NclP09405 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NclP09405 Gm42840-201ENSMUST00000200303 2251 ntBASIC18.46■□□□□ 0.54
NclP09405 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NclP09405 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Gm28323-201ENSMUST00000186817 2499 ntBASIC18.45■□□□□ 0.54
NclP09405 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NclP09405 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Gm12217-201ENSMUST00000118858 696 ntBASIC18.45■□□□□ 0.54
NclP09405 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC18.45■□□□□ 0.54
NclP09405 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Gm9230-201ENSMUST00000188228 532 ntBASIC18.45■□□□□ 0.54
NclP09405 Gm43138-201ENSMUST00000199123 708 ntBASIC18.45■□□□□ 0.54
NclP09405 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC18.45■□□□□ 0.54
NclP09405 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NclP09405 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NclP09405 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 AC121805.2-201ENSMUST00000218808 2538 ntBASIC18.44■□□□□ 0.54
NclP09405 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
NclP09405 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC18.44■□□□□ 0.54
NclP09405 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NclP09405 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC18.44■□□□□ 0.54
NclP09405 AC163667.3-201ENSMUST00000225774 222 ntBASIC18.44■□□□□ 0.54
NclP09405 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NclP09405 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC18.43■□□□□ 0.54
NclP09405 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.43■□□□□ 0.54
NclP09405 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Gm18626-201ENSMUST00000221512 1409 ntBASIC18.43■□□□□ 0.54
NclP09405 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NclP09405 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NclP09405 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC18.43■□□□□ 0.54
NclP09405 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NclP09405 Mir6927-201ENSMUST00000184494 71 ntBASIC18.43■□□□□ 0.54
NclP09405 Ighv5-7-201ENSMUST00000192302 244 ntBASIC18.43■□□□□ 0.54
NclP09405 Gm44958-201ENSMUST00000203734 736 ntBASIC18.43■□□□□ 0.54
NclP09405 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms