Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
ApoeP08226 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
ApoeP08226 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.77□□□□□ -0.53
ApoeP08226 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ApoeP08226 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
ApoeP08226 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.77□□□□□ -0.53
ApoeP08226 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.77□□□□□ -0.53
ApoeP08226 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
ApoeP08226 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.77□□□□□ -0.53
ApoeP08226 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.77□□□□□ -0.53
ApoeP08226 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ApoeP08226 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ApoeP08226 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ApoeP08226 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.76□□□□□ -0.53
ApoeP08226 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.76□□□□□ -0.53
ApoeP08226 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ApoeP08226 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.76□□□□□ -0.53
ApoeP08226 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ApoeP08226 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.75□□□□□ -0.53
ApoeP08226 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ApoeP08226 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ApoeP08226 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ApoeP08226 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Gm13123-201ENSMUST00000122173 492 ntBASIC11.75□□□□□ -0.53
ApoeP08226 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
ApoeP08226 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ApoeP08226 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
ApoeP08226 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms