Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P06344 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
P06344 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
P06344 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.1□□□□□ -0.63
P06344 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P06344 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P06344 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.1□□□□□ -0.63
P06344 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P06344 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P06344 Gm14999-201ENSMUST00000121039 624 ntBASIC11.1□□□□□ -0.63
P06344 Gm11597-201ENSMUST00000121423 964 ntBASIC11.1□□□□□ -0.63
P06344 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.1□□□□□ -0.63
P06344 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.1□□□□□ -0.63
P06344 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.1□□□□□ -0.63
P06344 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.1□□□□□ -0.63
P06344 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.1□□□□□ -0.63
P06344 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.1□□□□□ -0.63
P06344 Gm38241-201ENSMUST00000192641 898 ntBASIC11.1□□□□□ -0.63
P06344 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Gm6082-201ENSMUST00000215204 454 ntBASIC11.1□□□□□ -0.63
P06344 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.1□□□□□ -0.63
P06344 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P06344 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P06344 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.1□□□□□ -0.63
P06344 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.1□□□□□ -0.63
P06344 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P06344 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P06344 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.09□□□□□ -0.63
P06344 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.09□□□□□ -0.63
P06344 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P06344 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P06344 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P06344 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
P06344 Matn2-203ENSMUST00000226766 3252 ntBASIC11.09□□□□□ -0.63
P06344 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.09□□□□□ -0.63
P06344 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.09□□□□□ -0.63
P06344 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.09□□□□□ -0.63
P06344 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.09□□□□□ -0.63
P06344 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.09□□□□□ -0.63
P06344 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.09□□□□□ -0.63
P06344 Gm39404-201ENSMUST00000216350 313 ntBASIC11.09□□□□□ -0.63
P06344 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.09□□□□□ -0.63
P06344 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
P06344 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P06344 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P06344 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms