Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.94□□□□□ -0.66
P04224 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.94□□□□□ -0.66
P04224 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
P04224 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.94□□□□□ -0.66
P04224 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
P04224 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.94□□□□□ -0.66
P04224 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.94□□□□□ -0.66
P04224 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Gm11524-201ENSMUST00000119349 807 ntBASIC10.94□□□□□ -0.66
P04224 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.94□□□□□ -0.66
P04224 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.94□□□□□ -0.66
P04224 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.94□□□□□ -0.66
P04224 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Gm5279-201ENSMUST00000199575 745 ntBASIC10.94□□□□□ -0.66
P04224 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.94□□□□□ -0.66
P04224 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.94□□□□□ -0.66
P04224 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
P04224 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
P04224 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
P04224 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
P04224 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
P04224 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.94□□□□□ -0.66
P04224 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.94□□□□□ -0.66
P04224 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.94□□□□□ -0.66
P04224 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
P04224 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04224 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.93□□□□□ -0.66
P04224 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.93□□□□□ -0.66
P04224 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.93□□□□□ -0.66
P04224 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.93□□□□□ -0.66
P04224 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
P04224 Gm15376-201ENSMUST00000122258 783 ntBASIC10.93□□□□□ -0.66
P04224 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.93□□□□□ -0.66
P04224 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.93□□□□□ -0.66
P04224 Gm26464-201ENSMUST00000157094 305 ntBASIC10.93□□□□□ -0.66
P04224 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.93□□□□□ -0.66
P04224 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.93□□□□□ -0.66
P04224 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.93□□□□□ -0.66
P04224 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Gm9797-201ENSMUST00000052902 613 ntBASIC10.93□□□□□ -0.66
P04224 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.93□□□□□ -0.66
P04224 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P04224 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
P04224 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.93□□□□□ -0.66
P04224 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P04224 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
P04224 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
P04224 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.93□□□□□ -0.66
P04224 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P04224 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04224 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P04224 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04224 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P04224 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04224 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P04224 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms