Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H3f3cP02301 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H3f3cP02301 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H3f3cP02301 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
H3f3cP02301 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H3f3cP02301 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H3f3cP02301 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.72□□□□□ -0.69
H3f3cP02301 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H3f3cP02301 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H3f3cP02301 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
H3f3cP02301 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.71□□□□□ -0.69
H3f3cP02301 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
H3f3cP02301 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.71□□□□□ -0.69
H3f3cP02301 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.71□□□□□ -0.69
H3f3cP02301 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
H3f3cP02301 Gm45930-201ENSMUST00000221330 292 ntBASIC10.71□□□□□ -0.69
H3f3cP02301 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.71□□□□□ -0.69
H3f3cP02301 Daam2-202ENSMUST00000224595 1926 ntBASIC10.71□□□□□ -0.69
H3f3cP02301 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H3f3cP02301 Gm10478-201ENSMUST00000084451 396 ntBASIC10.71□□□□□ -0.69
H3f3cP02301 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
H3f3cP02301 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
H3f3cP02301 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H3f3cP02301 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.71□□□□□ -0.7
H3f3cP02301 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
H3f3cP02301 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H3f3cP02301 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.7□□□□□ -0.7
H3f3cP02301 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.7□□□□□ -0.7
H3f3cP02301 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.7□□□□□ -0.7
H3f3cP02301 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.7□□□□□ -0.7
H3f3cP02301 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H3f3cP02301 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.7□□□□□ -0.7
H3f3cP02301 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.7□□□□□ -0.7
H3f3cP02301 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Gm42627-201ENSMUST00000197347 224 ntBASIC10.7□□□□□ -0.7
H3f3cP02301 Gm43118-201ENSMUST00000199149 775 ntBASIC10.7□□□□□ -0.7
H3f3cP02301 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.7□□□□□ -0.7
H3f3cP02301 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H3f3cP02301 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H3f3cP02301 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.7□□□□□ -0.7
H3f3cP02301 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H3f3cP02301 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms