Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.1□□□□□ -0.95
TcraP01849 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
TcraP01849 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.1□□□□□ -0.95
TcraP01849 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.1□□□□□ -0.95
TcraP01849 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TcraP01849 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.09□□□□□ -0.95
TcraP01849 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.09□□□□□ -0.95
TcraP01849 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
TcraP01849 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.09□□□□□ -0.95
TcraP01849 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.09□□□□□ -0.95
TcraP01849 Gm27390-201ENSMUST00000184516 176 ntBASIC9.09□□□□□ -0.95
TcraP01849 Gm27321-201ENSMUST00000185021 205 ntBASIC9.09□□□□□ -0.95
TcraP01849 Gm43703-201ENSMUST00000200523 763 ntBASIC9.09□□□□□ -0.95
TcraP01849 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.09□□□□□ -0.95
TcraP01849 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.09□□□□□ -0.95
TcraP01849 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
TcraP01849 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC9.09□□□□□ -0.95
TcraP01849 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.09□□□□□ -0.95
TcraP01849 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.09□□□□□ -0.95
TcraP01849 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
TcraP01849 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
TcraP01849 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
TcraP01849 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
TcraP01849 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.08□□□□□ -0.96
TcraP01849 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
TcraP01849 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.08□□□□□ -0.96
TcraP01849 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Gm4875-201ENSMUST00000118257 786 ntBASIC9.08□□□□□ -0.96
TcraP01849 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
TcraP01849 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 Mir6956-201ENSMUST00000183598 62 ntBASIC9.08□□□□□ -0.96
TcraP01849 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.08□□□□□ -0.96
TcraP01849 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms