Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ifna1P01572 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.48□□□□□ -0.73
Ifna1P01572 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ifna1P01572 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.48□□□□□ -0.73
Ifna1P01572 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ifna1P01572 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.48□□□□□ -0.73
Ifna1P01572 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ifna1P01572 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ifna1P01572 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ifna1P01572 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.47□□□□□ -0.73
Ifna1P01572 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.47□□□□□ -0.73
Ifna1P01572 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ifna1P01572 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.47□□□□□ -0.73
Ifna1P01572 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.47□□□□□ -0.73
Ifna1P01572 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.47□□□□□ -0.73
Ifna1P01572 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.47□□□□□ -0.73
Ifna1P01572 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.47□□□□□ -0.73
Ifna1P01572 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.47□□□□□ -0.73
Ifna1P01572 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.47□□□□□ -0.73
Ifna1P01572 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Ifna1P01572 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.47□□□□□ -0.73
Ifna1P01572 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.47□□□□□ -0.73
Ifna1P01572 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.47□□□□□ -0.73
Ifna1P01572 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ifna1P01572 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.47□□□□□ -0.73
Ifna1P01572 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.47□□□□□ -0.73
Ifna1P01572 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.47□□□□□ -0.73
Ifna1P01572 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.47□□□□□ -0.73
Ifna1P01572 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.47□□□□□ -0.73
Ifna1P01572 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.47□□□□□ -0.73
Ifna1P01572 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ifna1P01572 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ifna1P01572 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ifna1P01572 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms