Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hcn1O88704 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Hcn1O88704 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Hcn1O88704 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Hcn1O88704 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Gm17208-201ENSMUST00000168388 535 ntBASIC11.94□□□□□ -0.5
Hcn1O88704 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.94□□□□□ -0.5
Hcn1O88704 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.94□□□□□ -0.5
Hcn1O88704 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hcn1O88704 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hcn1O88704 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Hcn1O88704 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Hcn1O88704 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.94□□□□□ -0.5
Hcn1O88704 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.94□□□□□ -0.5
Hcn1O88704 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.94□□□□□ -0.5
Hcn1O88704 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hcn1O88704 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcn1O88704 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hcn1O88704 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hcn1O88704 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.93□□□□□ -0.5
Hcn1O88704 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.93□□□□□ -0.5
Hcn1O88704 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Gm27572-201ENSMUST00000183702 255 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.93□□□□□ -0.5
Hcn1O88704 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Gm37008-201ENSMUST00000195712 319 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.93□□□□□ -0.5
Hcn1O88704 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Hcn1O88704 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.93□□□□□ -0.5
Hcn1O88704 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hcn1O88704 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hcn1O88704 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.93□□□□□ -0.5
Hcn1O88704 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.93□□□□□ -0.5
Hcn1O88704 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hcn1O88704 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hcn1O88704 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Hcn1O88704 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Hcn1O88704 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hcn1O88704 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms