Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ClppO88696 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClppO88696 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
ClppO88696 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ClppO88696 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.23□□□□□ -0.45
ClppO88696 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.23□□□□□ -0.45
ClppO88696 Gm13492-201ENSMUST00000119772 665 ntBASIC12.23□□□□□ -0.45
ClppO88696 Gm14726-201ENSMUST00000120623 896 ntBASIC12.23□□□□□ -0.45
ClppO88696 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.23□□□□□ -0.45
ClppO88696 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.23□□□□□ -0.45
ClppO88696 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.23□□□□□ -0.45
ClppO88696 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.23□□□□□ -0.45
ClppO88696 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.23□□□□□ -0.45
ClppO88696 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.23□□□□□ -0.45
ClppO88696 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ClppO88696 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ClppO88696 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ClppO88696 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ClppO88696 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClppO88696 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ClppO88696 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.22□□□□□ -0.45
ClppO88696 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.22□□□□□ -0.45
ClppO88696 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.22□□□□□ -0.45
ClppO88696 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.22□□□□□ -0.45
ClppO88696 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ClppO88696 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.22□□□□□ -0.45
ClppO88696 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.22□□□□□ -0.45
ClppO88696 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ClppO88696 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
ClppO88696 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClppO88696 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.21□□□□□ -0.45
ClppO88696 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.21□□□□□ -0.45
ClppO88696 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClppO88696 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms