Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
Cops4O88544 Gm27437-201ENSMUST00000183429 107 ntBASIC11.49□□□□□ -0.57
Cops4O88544 Gm44397-201ENSMUST00000195950 113 ntBASIC11.49□□□□□ -0.57
Cops4O88544 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Cops4O88544 Gm6458-201ENSMUST00000211573 635 ntBASIC11.49□□□□□ -0.57
Cops4O88544 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.49□□□□□ -0.57
Cops4O88544 Gm18624-201ENSMUST00000220966 658 ntBASIC11.49□□□□□ -0.57
Cops4O88544 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Cops4O88544 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.49□□□□□ -0.57
Cops4O88544 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.49□□□□□ -0.57
Cops4O88544 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.49□□□□□ -0.57
Cops4O88544 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cops4O88544 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.49□□□□□ -0.57
Cops4O88544 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cops4O88544 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.48□□□□□ -0.57
Cops4O88544 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Gm12859-201ENSMUST00000117834 427 ntBASIC11.48□□□□□ -0.57
Cops4O88544 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Mir6392-201ENSMUST00000184924 108 ntBASIC11.48□□□□□ -0.57
Cops4O88544 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.48□□□□□ -0.57
Cops4O88544 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.48□□□□□ -0.57
Cops4O88544 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.48□□□□□ -0.57
Cops4O88544 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cops4O88544 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Cops4O88544 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cops4O88544 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Cops4O88544 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cops4O88544 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cops4O88544 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cops4O88544 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Cops4O88544 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Gm15429-201ENSMUST00000151268 798 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Auts2-212ENSMUST00000178555 309 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Mir7654-201ENSMUST00000185082 70 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Itm2b-204ENSMUST00000228637 783 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Gm2423-201ENSMUST00000074863 733 ntBASIC11.47□□□□□ -0.57
Cops4O88544 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cops4O88544 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.47□□□□□ -0.57
Cops4O88544 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms