Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim1O70400 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim1O70400 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pdlim1O70400 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pdlim1O70400 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm2991-201ENSMUST00000173338 480 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Mir8109-201ENSMUST00000184375 117 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm28882-201ENSMUST00000185504 314 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm43179-201ENSMUST00000198797 275 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm44124-201ENSMUST00000204159 472 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm30285-201ENSMUST00000214614 422 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdlim1O70400 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim1O70400 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.33□□□□□ -0.44
Pdlim1O70400 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim1O70400 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pdlim1O70400 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm25214-201ENSMUST00000104573 129 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pdlim1O70400 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm9083-201ENSMUST00000120423 819 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim1O70400 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm44364-201ENSMUST00000198368 141 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm45865-201ENSMUST00000211815 945 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim1O70400 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim1O70400 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim1O70400 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.32□□□□□ -0.44
Pdlim1O70400 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pdlim1O70400 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.32□□□□□ -0.44
Pdlim1O70400 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pdlim1O70400 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.31□□□□□ -0.44
Pdlim1O70400 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.31□□□□□ -0.44
Pdlim1O70400 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdlim1O70400 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdlim1O70400 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms