Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf13O54965 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf13O54965 Gm45668-201ENSMUST00000211271 493 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rnf13O54965 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rnf13O54965 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf13O54965 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Rnf13O54965 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.27□□□□□ -0.61
Rnf13O54965 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf13O54965 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Rnf13O54965 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf13O54965 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf13O54965 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.26□□□□□ -0.61
Rnf13O54965 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.26□□□□□ -0.61
Rnf13O54965 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm17208-201ENSMUST00000168388 535 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm5866-201ENSMUST00000177881 973 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.26□□□□□ -0.61
Rnf13O54965 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm42599-201ENSMUST00000201308 469 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm8463-201ENSMUST00000208573 613 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf13O54965 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm8598-201ENSMUST00000221184 836 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf13O54965 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf13O54965 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rnf13O54965 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.26□□□□□ -0.61
Rnf13O54965 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf13O54965 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf13O54965 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf13O54965 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf13O54965 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.25□□□□□ -0.61
Rnf13O54965 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Rnf13O54965 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf13O54965 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms