Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ChkaO54804 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.58□□□□□ -0.4
ChkaO54804 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.58□□□□□ -0.4
ChkaO54804 Gm1335-201ENSMUST00000121653 386 ntBASIC12.58□□□□□ -0.4
ChkaO54804 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.58□□□□□ -0.4
ChkaO54804 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.58□□□□□ -0.4
ChkaO54804 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Gm27243-201ENSMUST00000183964 521 ntBASIC12.58□□□□□ -0.4
ChkaO54804 Gm8227-201ENSMUST00000223306 571 ntBASIC12.58□□□□□ -0.4
ChkaO54804 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ChkaO54804 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ChkaO54804 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ChkaO54804 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.58□□□□□ -0.4
ChkaO54804 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ChkaO54804 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ChkaO54804 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.58□□□□□ -0.4
ChkaO54804 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.58□□□□□ -0.4
ChkaO54804 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.57□□□□□ -0.4
ChkaO54804 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ChkaO54804 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ChkaO54804 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.57□□□□□ -0.4
ChkaO54804 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.57□□□□□ -0.4
ChkaO54804 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
ChkaO54804 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.57□□□□□ -0.4
ChkaO54804 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ChkaO54804 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.57□□□□□ -0.4
ChkaO54804 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ChkaO54804 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
ChkaO54804 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ChkaO54804 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.56□□□□□ -0.4
ChkaO54804 Gm13492-201ENSMUST00000119772 665 ntBASIC12.56□□□□□ -0.4
ChkaO54804 Gm13315-201ENSMUST00000120376 991 ntBASIC12.56□□□□□ -0.4
ChkaO54804 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.56□□□□□ -0.4
ChkaO54804 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.56□□□□□ -0.4
ChkaO54804 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ChkaO54804 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Gm6266-201ENSMUST00000203844 806 ntBASIC12.56□□□□□ -0.4
ChkaO54804 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.56□□□□□ -0.4
ChkaO54804 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Gm24136-201ENSMUST00000083374 165 ntBASIC12.56□□□□□ -0.4
ChkaO54804 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.56□□□□□ -0.4
ChkaO54804 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.56□□□□□ -0.4
ChkaO54804 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ChkaO54804 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms