Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.83□□□□□ -0.36
Sdc4O35988 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sdc4O35988 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.83□□□□□ -0.36
Sdc4O35988 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.83□□□□□ -0.36
Sdc4O35988 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.83□□□□□ -0.36
Sdc4O35988 Gm5070-201ENSMUST00000177599 862 ntBASIC12.83□□□□□ -0.36
Sdc4O35988 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.83□□□□□ -0.36
Sdc4O35988 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.83□□□□□ -0.36
Sdc4O35988 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.83□□□□□ -0.36
Sdc4O35988 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.83□□□□□ -0.36
Sdc4O35988 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.83□□□□□ -0.36
Sdc4O35988 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.83□□□□□ -0.36
Sdc4O35988 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.83□□□□□ -0.36
Sdc4O35988 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.83□□□□□ -0.36
Sdc4O35988 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sdc4O35988 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sdc4O35988 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Gm14277-201ENSMUST00000121195 360 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Gm6963-201ENSMUST00000147879 379 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sdc4O35988 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Gm9022-201ENSMUST00000182482 992 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Gm32999-201ENSMUST00000192693 562 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Gm44958-201ENSMUST00000203734 736 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Gm19187-201ENSMUST00000206781 892 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.82□□□□□ -0.36
Sdc4O35988 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.82□□□□□ -0.36
Sdc4O35988 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.82□□□□□ -0.36
Sdc4O35988 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Sdc4O35988 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sdc4O35988 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sdc4O35988 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.81□□□□□ -0.36
Sdc4O35988 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.81□□□□□ -0.36
Sdc4O35988 Gm24990-201ENSMUST00000157406 323 ntBASIC12.81□□□□□ -0.36
Sdc4O35988 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.81□□□□□ -0.36
Sdc4O35988 Gm42937-201ENSMUST00000197360 752 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms