Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn3O35701 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn3O35701 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn3O35701 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn3O35701 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Matn3O35701 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn3O35701 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Matn3O35701 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.31□□□□□ -0.6
Matn3O35701 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.31□□□□□ -0.6
Matn3O35701 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.31□□□□□ -0.6
Matn3O35701 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.31□□□□□ -0.6
Matn3O35701 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.31□□□□□ -0.6
Matn3O35701 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn3O35701 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.31□□□□□ -0.6
Matn3O35701 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Matn3O35701 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Matn3O35701 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.3□□□□□ -0.6
Matn3O35701 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.3□□□□□ -0.6
Matn3O35701 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.3□□□□□ -0.6
Matn3O35701 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.3□□□□□ -0.6
Matn3O35701 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.3□□□□□ -0.6
Matn3O35701 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.3□□□□□ -0.6
Matn3O35701 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Gm43094-201ENSMUST00000196549 921 ntBASIC11.3□□□□□ -0.6
Matn3O35701 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Matn3O35701 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.3□□□□□ -0.6
Matn3O35701 Gm26315-201ENSMUST00000083890 321 ntBASIC11.3□□□□□ -0.6
Matn3O35701 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Matn3O35701 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Matn3O35701 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.3□□□□□ -0.6
Matn3O35701 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Matn3O35701 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Matn3O35701 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Matn3O35701 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Matn3O35701 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Matn3O35701 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Matn3O35701 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Matn3O35701 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms