Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
AlyrefO08583 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.68□□□□□ -0.38
AlyrefO08583 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AlyrefO08583 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AlyrefO08583 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
AlyrefO08583 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Gm13022-201ENSMUST00000121181 285 ntBASIC12.67□□□□□ -0.38
AlyrefO08583 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.67□□□□□ -0.38
AlyrefO08583 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.67□□□□□ -0.38
AlyrefO08583 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.67□□□□□ -0.38
AlyrefO08583 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Gm7904-201ENSMUST00000217049 465 ntBASIC12.67□□□□□ -0.38
AlyrefO08583 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Ginm1-202ENSMUST00000065124 300 ntBASIC12.67□□□□□ -0.38
AlyrefO08583 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.67□□□□□ -0.38
AlyrefO08583 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
AlyrefO08583 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Pck2-205ENSMUST00000226352 2784 ntBASIC12.67□□□□□ -0.38
AlyrefO08583 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
AlyrefO08583 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.67□□□□□ -0.38
AlyrefO08583 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
AlyrefO08583 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AlyrefO08583 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.66□□□□□ -0.38
AlyrefO08583 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AlyrefO08583 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
AlyrefO08583 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Gm11979-201ENSMUST00000119629 743 ntBASIC12.66□□□□□ -0.38
AlyrefO08583 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
AlyrefO08583 Gm6963-201ENSMUST00000147879 379 ntBASIC12.66□□□□□ -0.38
AlyrefO08583 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.66□□□□□ -0.38
AlyrefO08583 Gm32025-201ENSMUST00000217960 307 ntBASIC12.66□□□□□ -0.38
AlyrefO08583 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.66□□□□□ -0.38
AlyrefO08583 AC124408.1-201ENSMUST00000228938 707 ntBASIC12.66□□□□□ -0.38
AlyrefO08583 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AlyrefO08583 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.66□□□□□ -0.38
AlyrefO08583 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AlyrefO08583 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AlyrefO08583 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AlyrefO08583 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
AlyrefO08583 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AlyrefO08583 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AlyrefO08583 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
AlyrefO08583 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AlyrefO08583 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AlyrefO08583 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms