Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.54■□□□□ 0.56
Pcf11G3X9Z4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Gm37348-201ENSMUST00000193104 1789 ntBASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Gm25076-201ENSMUST00000104098 132 ntBASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Gm37905-201ENSMUST00000195310 341 ntBASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Gm2517-201ENSMUST00000215651 348 ntBASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 AC140293.1-201ENSMUST00000225626 1247 ntBASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Gm27196-201ENSMUST00000184787 2582 ntBASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcf11G3X9Z4 Gm38094-201ENSMUST00000195864 2978 ntBASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcf11G3X9Z4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcf11G3X9Z4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcf11G3X9Z4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcf11G3X9Z4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcf11G3X9Z4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcf11G3X9Z4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Pcf11G3X9Z4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm13328-201ENSMUST00000120816 1020 ntBASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm7600-201ENSMUST00000209657 785 ntBASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm18974-201ENSMUST00000221478 1031 ntBASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 CT009489.1-201ENSMUST00000227740 1893 ntBASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm12419-201ENSMUST00000116649 636 ntBASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm15725-201ENSMUST00000119947 1090 ntBASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm23045-201ENSMUST00000175041 96 ntBASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcf11G3X9Z4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Gm11660-201ENSMUST00000120955 412 ntBASIC18.5■□□□□ 0.55
Pcf11G3X9Z4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms