Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm13612-201ENSMUST00000119276 390 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm16479-201ENSMUST00000121706 932 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm12091-201ENSMUST00000146791 830 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdh1F7BJK1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh1F7BJK1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Gm17208-201ENSMUST00000168388 535 ntBASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.2□□□□□ -0.62
Pcdh1F7BJK1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm8213-201ENSMUST00000118191 441 ntBASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pcdh1F7BJK1 Gm27331-201ENSMUST00000183705 60 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms