Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Gm45186-201ENSMUST00000206874 478 ntBASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb9E9Q5G2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gm26361-201ENSMUST00000158868 186 ntBASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gm9230-201ENSMUST00000188228 532 ntBASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gm44124-201ENSMUST00000204159 472 ntBASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gm19187-201ENSMUST00000206781 892 ntBASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb9E9Q5G2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Gm32999-201ENSMUST00000192693 562 ntBASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Gm45598-202ENSMUST00000210719 986 ntBASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb9E9Q5G2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
Pcdhb9E9Q5G2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb9E9Q5G2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb9E9Q5G2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb9E9Q5G2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Gm13296-201ENSMUST00000117854 997 ntBASIC14.58□□□□□ -0.08
Pcdhb9E9Q5G2 Gm14130-201ENSMUST00000118417 987 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms