Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Gm43721-201ENSMUST00000199677 2313 ntBASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Retreg1-206ENSMUST00000228306 1430 ntBASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Gm40879-201ENSMUST00000220759 612 ntBASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf11E9PZM7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Gm44056-201ENSMUST00000204623 1427 ntBASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Gm43267-201ENSMUST00000199664 1796 ntBASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Gm8617-201ENSMUST00000118796 2222 ntBASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Gm25766-201ENSMUST00000104101 131 ntBASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Gm18041-201ENSMUST00000218210 618 ntBASIC17.1■□□□□ 0.33
Scaf11E9PZM7 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scaf11E9PZM7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Gm12407-201ENSMUST00000180219 324 ntBASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 AC129308.3-201ENSMUST00000225652 524 ntBASIC17.09■□□□□ 0.33
Scaf11E9PZM7 AC121960.1-201ENSMUST00000227982 564 ntBASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scaf11E9PZM7 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC17.08■□□□□ 0.33
Scaf11E9PZM7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scaf11E9PZM7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms