Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gm7150-201ENSMUST00000122032 981 ntBASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Mir3100-201ENSMUST00000174918 65 ntBASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gm4310-201ENSMUST00000177847 889 ntBASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a3E9PWQ3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm23129-201ENSMUST00000104259 132 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 H2afy3-201ENSMUST00000151919 1112 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm7833-201ENSMUST00000183288 990 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm42908-201ENSMUST00000197508 870 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm18391-201ENSMUST00000217189 658 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm23582-201ENSMUST00000158530 139 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm15373-201ENSMUST00000121495 214 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a3E9PWQ3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm13505-201ENSMUST00000121666 817 ntBASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm24933-201ENSMUST00000103762 110 ntBASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm23252-201ENSMUST00000103776 110 ntBASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm25872-201ENSMUST00000177784 100 ntBASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm26443-201ENSMUST00000179610 110 ntBASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a3E9PWQ3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms