Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm12203-201ENSMUST00000118235 598 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm12209-201ENSMUST00000120089 596 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm13123-201ENSMUST00000122173 492 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm24644-201ENSMUST00000157114 139 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm28693-202ENSMUST00000190758 331 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm37497-201ENSMUST00000195830 798 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Gm22331-201ENSMUST00000158066 136 ntBASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28043E0CXC2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Gm17150-201ENSMUST00000165577 381 ntBASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28043E0CXC2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 248.5 ms