Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm32025-201ENSMUST00000217960 307 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clip3B9EHT4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Clip3B9EHT4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Clip3B9EHT4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Gm13342-201ENSMUST00000121055 207 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 Gm23363-201ENSMUST00000175024 79 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 Mospd4-201ENSMUST00000180618 576 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Gm38158-201ENSMUST00000194617 339 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 Gm5781-201ENSMUST00000219792 443 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.14□□□□□ -0.47
Clip3B9EHT4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clip3B9EHT4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Clip3B9EHT4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms