Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm8213-201ENSMUST00000118191 441 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm11918-201ENSMUST00000121660 179 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm12138-201ENSMUST00000122180 951 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm12363-201ENSMUST00000122250 668 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm16296-201ENSMUST00000159905 325 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm37497-201ENSMUST00000195830 798 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm8099-201ENSMUST00000200510 742 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Phf11cB4XVP9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.77□□□□□ -0.52
Phf11cB4XVP9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Phf11cB4XVP9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Phf11cB4XVP9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms