Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Gm12029-201ENSMUST00000120073 832 ntBASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn2B2RVW2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm13888-201ENSMUST00000119148 422 ntBASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm7722-201ENSMUST00000120646 741 ntBASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm4482-201ENSMUST00000200876 742 ntBASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Ginm1-202ENSMUST00000065124 300 ntBASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm26448-201ENSMUST00000082446 203 ntBASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn2B2RVW2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm3332-201ENSMUST00000189337 928 ntBASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn2B2RVW2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms